Gee-logit model corrected biplots with harvest effects on coffee beans grading

Authors

DOI:

https://doi.org/10.14393/BJ-v37n0a2021-53679

Keywords:

DVS, Generalized Estimating Equations, Uniform Correlation Structure.

Abstract

In a granulometric analysis of coffee beans with different categories of defects, the data can be organized in contingency tables, and when considering the discrimination by harvest, they may have a structure that suggest a more complex model, by means of the counting of defective coffee beans compared to different crops interacting with the classification of defects and percentages of sieve grains, which characterizes a block design with multivariate responses. However, due to the techniques based on the analysis of variance, considering the uniform correlation structure for all plots, it becomes feasible to propose a model that allows contemplating different structures between the plots, associating the effects of the crops to the defects in the granulometric procedure applied to the coffee beans. Thus, the hypothesis of incorporating the effects of crops associated with defects arises using the biplot multivariate technique. This work aims to propose the use of corrected biplots by predictions obtained trhough the fit to the Generalized Linear Model in the coffee grain size classification, broken down by components of the effect of the harvests. In conclusion, the use of GEE models with the corrected biplot technique by the predictions is feasible for application to be applied to the granulometric analysis of defective coffee beans, presenting discrimination regarding the effects of harvests.

Downloads

Download data is not yet available.

References

BRIGHENTI, C.R.G. and CIRILLO, M.A. Analysis of defects in coffee beans compared to biplots for simultaneous tables. Revista Ciência Agronômica. 2018, 49(1), 62-69. https://doi.org/10.5935/1806-6690.20180007

CENTRO DE COMERCIO DE CAFÉ DO ESTADO DE MINAS GERAIS. Manual de Classificação: Métodos de Classificação de Café utilizados pelo CCCMG. 2018. Available from: http://cccmg.com.br/manual-de-classificacao/

COSTA, A.L.A., BRIGHENTI, C.R.G. and CIRILLO, M.A. A new approach to simple correspondence analysis with emphasis on the violation of the independence assumption of the levels of categorical variables. Acta Scientiarum. 2018, 40, 1-7. https://doi.org/10.4025/actascitechnol.v40i1.34953

ESQUIVEL, P. and JIMÉNEZ, V.M. Functional properties of coffee and coffee by-products. Food Research International. 2012, 46(2), 488–495. https://doi.org/10.1016/j.foodres.2011.05.028

CHAMBERS, J.M. Graphical methods for data analysis. Boca Raton: CRC Press, 2018.

GREENACRE, M. Singular value decomposition of matched matrices. Journal of Applied Statistics. 2003, 30(10), 1101-1113. https://doi.org/10.1080/0266476032000107132

MAIR, P. Modern psychometrics with R. New York: Springer International Publishing, 2018.

MOURA, W.M., et al. Genetic diversity in arabica coffee grown in potassium-constrained environment. Ciência e Agrotecnologia. 2015, 39(1), 23-31. https://doi.org/10.1590/S1413-70542015000100003

WANG, L. and WEI, M.A. Improved empirical likelihood inference and variable selection for generalized linear models with longitudinal nonignorable dropouts. Annals of the Institute of Statistical Mathematics. 2021, 73(3), 623-647. https://doi.org/10.1007/s10463-020-00761-4.

R CORE TEAM. R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing, 2016. Available from: http://www.r-project.org.

SILVA, J.A. and CIRILLO, M.A. Selection criterion of work matrix as a function of limiting estimates of the covariance matrix of correlated data in GEE. Biometrical Journal. 2018, 60(5), 979-990. https://doi.org/10.1002/bimj.201800035

SOARES, W.L., et al. Qualidade do café arábica por diferentes granulometrais. Ciência Agrícola. 2019, 17(1), 31-35. https://doi.org/10.28998/rca.v17i1.6495

TORRES‐SALINAS, D., et al. On the use of biplot analysis for multivariate bibliometric and scientific indicators. Journal of the American Society for Information Science and Technology. 2013, 64(7), 1468-1479. https://doi.org/10.1002/asi.22837

Downloads

Published

2021-08-20

How to Cite

FERREIRA, H.A., RESENDE DE OLIVEIRA, Érica ., GUIMARÃES BRIGHENTI, C.R. and CIRILLO, M. Ângelo, 2021. Gee-logit model corrected biplots with harvest effects on coffee beans grading. Bioscience Journal [online], vol. 37, pp. e37044. [Accessed26 July 2024]. DOI 10.14393/BJ-v37n0a2021-53679. Available from: https://seer.ufu.br/index.php/biosciencejournal/article/view/53679.

Issue

Section

Agricultural Sciences